Coupling remote sensing and eDNA to monitor environmental impact: A pilot to quantify the environmental benefits of sustainable agriculture in the Brazilian Amazon.

Monitoring is essential to ensure that environmental goals are being achieved, including those of sustainable agriculture. Growing interest in environmental monitoring provides an opportunity to improve monitoring practices. Approaches that directly monitor land cover change and biodiversity annually by coupling the wall-to-wall coverage from remote sensing and the site-specific community composition from environmental DNA (eDNA) can provide timely, relevant results for parties interested in the success of sustainable agricultural practices. To ensure that the measured impacts are due to the environmental projects and not exogenous factors, sites where projects have been implemented should be benchmarked against counterfactuals (no project) and control (natural habitat) sites. Results can then be used to calculate diverse sets of indicators customized to monitor different projects. Here, we report on our experience developing and applying one such approach to assess the impact of shaded cocoa projects implemented by the Instituto de Manejo e Certificação Florestal e Agrícola (IMAFLORA) near São Félix do Xingu, in Pará, Brazil. We used the Continuous Degradation Detection (CODED) and LandTrendr algorithms to create a remote sensing-based assessment of forest disturbance and regeneration, estimate carbon sequestration, and changes in essential habitats. We coupled these remote sensing methods with eDNA analyses using arthropod-targeted primers by collecting soil samples from intervention and counterfactual pasture field sites and a control secondary forest. We used a custom set of indicators from the pilot application of a coupled monitoring framework called TerraBio. Our results suggest that, due to IMAFLORA's shaded cocoa projects, over 400 acres were restored in the intervention area and the community composition of arthropods in shaded cocoa is closer to second-growth forests than that of pastures. In reviewing the coupled approach, we found multiple aspects worked well, and we conclude by presenting multiple lessons learned.

Formación de un humedal en la costa norte del Perú: estabilidad biofísica y diversidad biológica

Se describe, analiza y reporta por primera vez la formación de un humedal costero en el sur de Salaverry (La Libertad, Perú). Se realiza la comparación del número de especies con otros humedales ubicados en áreas costeras de la región, empleando para ello imágenes satelitales de acceso público e información biológica. Se obtuvo una serie de tiempo suficiente para plantear una hipótesis sobre su formación, calculando el NDVI (Índice de Vegetación de Diferencia Normalizada) y NDMI (Índice de Humedad de Diferencia Normalizada) para confirmar su estabilidad e influencia. El resultado del análisis sugiere que el humedal sur de Salaverry se formó hace quince años por dos aportes antrópicos: filtraciones de agua dulces desde terrenos agrícolas y agua de mar usada para el bombeo del material dragado en las inmediaciones del Puerto de Salaverry. Por sus características ecosistémicas, el humedal se encontraría en las primeras etapas de sucesión ecológica, y a pesar de origen espontáneo, estaría operando como una laguna costera salobre que atrae fauna oportunista, principalmente aves.

The formation of a coastal wetland located south of Salaverry (La Libertad - Peru) is first described, analyzed, and reported, and their biodiversity is compared with regional wetlands located at coastal areas, using publically access satellite imagery and biological information. An adequate time-series was obtained to hypothesize their formation, calculating the NDVI (Normalized difference vegetation index) and NDMI (Normalized Difference Moisture Index) to confirm the stability and influence. The analysis suggests that the wetland south of Salaverry was formed fifteen years ago by two human sources: freshwater infiltration from farmlands and seawater used to pump the dredged material in the vicinity of the Salaverry Port. Because of its ecosystemic features, the wetland would be at the first stages of the ecological succession, and despite its spontaneous origin, it will be functioning as a brackish coastal lagoon attracting opportunistic fauna, mainly birds.

Environmental and climatic impact on the infection and mortality of SARS-CoV-2 in Peru.

OBJECTIVES: The role of the environment and climate in the transmission and case fatality rates of SARS-CoV-2 is still being investigated a year into the pandemic. Elevation and air quality are believed to be significant factors in the development of the pandemic, but the influence of additional environmental factors remains unclear. METHODS: We explored the relationship between the cumulative number of infections and mortality cases with climate (temperature, precipitation, solar radiation, water vapor pressure, wind), environmental data (elevation, normalized difference vegetation index or NDVI, particulate matter at 2.5 µm or PM2.5 and NO2 concentration), and population density in Peru. We use confirmed cases of infection from 1,287 districts and mortality in 479 districts, we used Spearman's correlations to assess the bivariate correlation between environmental and climatic factors with cumulative infection cases, cumulative mortality and case-fatality rate. We explored district cases within the ecozones of coast, sierra, high montane forest and lowland rainforest. RESULTS: Multiple linear regression models indicate elevation, mean solar radiation, air quality, population density and green vegetation cover, as a socioeconomic proxy, are influential factors in the distribution of infection and mortality of SARS-CoV-2 in Peru. Case-fatality rate was weakly associated with elevation. CONCLUSIONS: Our results also strongly suggest that exposure to poor air quality is a significant factor in the mortality of individuals below the age of 30. We conclude that environmental and climatic factors do play a significant role in the transmission and case fatality rates in Peru, however further study is required to see if these relationships are maintained over time.

Prediciendo la distribución de Polylepis: bosques Andinos vulnerables y cada vez más importantes

Los bosques de Polylepis son recursos vitales para la conservación de la biodiversidad y funciones hidrológicas, la cual se verá alterada por el cambio climático a nivel mundial desafiando la sostenibilidad de las comunidades locales. Sin embargo, estos ecosistemas andinos de gran altitud son cada vez más vulnerables debido a la presión antropogénica como la fragmentación, deforestación y el incremento en el ganado. La importancia para predecir la distribución de bosques nativos ha aumentado para contrarrestar los efectos negativos del cambio climático a través de la conservación y la reforestación. El objetivo de este estudio fue desarrollar y analizar los modelos de distribución de dos especies, Polylepis sericea y P. besseri, que forman bosques extensos a lo largo de los Andes. Este estudio utilizó el programa Maxent, el clima y capas ambientales de una resolución de 1 Km. El modelo de distribución previsto para P. sericea indica que la especie podría estar situada en una variedad de hábitats a lo largo de la Cordillera de los Andes, mientras que P. besseri se limitaba a las grandes alturas del sur de Perú y Bolivia. Para ambas especies, los metros de elevación y la temperatura son los factores más importantes para la distribución prevista. El perfeccionamiento del modelo de Polylepis y otras especies andinas utilizando datos de satélites cada vez más disponibles al público demuestran el potencial para ayudar a definir las áreas de diversidad y mejorar las estrategias de conservación en los Andes.

Polylepis woodlands are a vital resource for preserving biodiversity and hydrological functions, which will be altered by climate change and challenge the sustainability of local human communities. However, these high-altitude Andean ecosystems are becoming increasingly vulnerable due to anthropogenic pressure including fragmentation, deforestation and the increase in livestock. Predicting the distribution of native woodlands has become increasingly important to counteract the negative effects of climate change through reforestation and conservation. The objective of this study was to develop and analyze the distribution models of two species that form extensive woodlands along the Andes, namely Polylepis sericea and P. weberbaueri. This study utilized the program Maxent, climate and remotely sensed environmental layers at 1 Km resolution. The predicted distribution model for P. sericea indicated that the species could be located in a variety of habitats along the Andean Cordillera, while P. weberbaueri was restricted to the high elevations of southern Peru and Bolivia. For both species, elevation and temperature metrics were the most significant factors for predicted distribution. Further model refinement of Polylepis and other Andean species using increasingly available satellite data demonstrate the potential to help define areas of diversity and improve conservation strategies for the Andes.

Benchmark map of forest carbon stocks in tropical regions across three continents.

Developing countries are required to produce robust estimates of forest carbon stocks for successful implementation of climate change mitigation policies related to reducing emissions from deforestation and degradation (REDD). Here we present a "benchmark" map of biomass carbon stocks over 2.5 billion ha of forests on three continents, encompassing all tropical forests, for the early 2000s, which will be invaluable for REDD assessments at both project and national scales. We mapped the total carbon stock in live biomass (above- and belowground), using a combination of data from 4,079 in situ inventory plots and satellite light detection and ranging (Lidar) samples of forest structure to estimate carbon storage, plus optical and microwave imagery (1-km resolution) to extrapolate over the landscape. The total biomass carbon stock of forests in the study region is estimated to be 247 Gt C, with 193 Gt C stored aboveground and 54 Gt C stored belowground in roots. Forests in Latin America, sub-Saharan Africa, and Southeast Asia accounted for 49%, 25%, and 26% of the total stock, respectively. By analyzing the errors propagated through the estimation process, uncertainty at the pixel level (100 ha) ranged from ± 6% to ± 53%, but was constrained at the typical project (10,000 ha) and national (>1,000,000 ha) scales at ca. ± 5% and ca. ± 1%, respectively. The benchmark map illustrates regional patterns and provides methodologically comparable estimates of carbon stocks for 75 developing countries where previous assessments were either poor or incomplete.